Group Members
Tozburun Lab. on Biophotonics and Optical Imaging
Research Group Leader
Serhat TOZBURUN
serhat.tozburun@ibg.edu.tr
+90 232 299 41 00
(5101)
+9
0 232 299 41 60
Ender Berat ELLİDOKUZ
Research Group Member
ender.ellidokuz@ibg.edu.tr
Ensari GÜNELİ
Research Group Member
ensari.guneli@ibg.edu.tr
Merve TÜRKER
PhD Student
merve.turker@ibg.edu.tr
Nejbir AKYOL
Undergraduate Student
nejbir.akyol@ibg.edu.tr
Müge TOPCU
MSc Student
muge.topcu@ibg.edu.tr
Seval ÜNAL
MSc Student
seval.unal@ibg.edu.tr
Giray Nuri MAVİŞ
MSc Student
giray.mavis@std.ibg.edu.tr
Former Members
Mahmut Ozan GÖKKAN
MSc Student
ozan.gokkan@msfr.ibg.edu.tr
İbrahim AKKAYA
Researcher
ibrahim.akkaya@ibg.edu.tr
Turan Ögetay KAYALI
PhD Student
turanogetay.kayali@msfr.ibg.edu.tr
Merve TÜRKER
PhD Student
merve.turker@ibg.edu.tr
Ozan YETİŞ
MSc Student
ozan.yetis@msfr.ibg.edu.tr
Onur ÇAKI
MSc Student
onur.caki@msfr.ibg.edu.tr
Hanife GÖKKAN
Undergraduate Student
hanife.gokkan@ibg.edu.tr
0 (232) 299 _ _
Alptekin FADILOĞLU
PhD Student
alptekin.fadiloglu@ibg.edu.tr
Hanife GÖKKAN
MSc Student
hanife.gokkan@ibg.edu.tr
0 (232) 299 _ _
SEMA ÖZALTUNER ÖZÜTÜRKER
MSc Student
sema.ozuturker@msfr.ibg.edu.tr
İbrahim AKKAYA
Visiting Researcher
ibrahim.akkaya@ibg.edu.tr
Emre GÜRALP
Undergraduate Student
emre.guralp@ibg.edu.tr
Emirhan TOSUN
Researcher
emirhan.tosun@ibg.edu.tr
Güldeniz Gülcan
MSc Student
guldeniz.gulcan@ibg.edu.tr
Ömer Faruk DİNÇ
PhD Student
omer.dinc@ibg.edu.tr
Emre GÜRALP
Undergraduate Student
emre.guralp@ibg.edu.tr
Seval ÜNAL
Undergraduate Student
seval.unal@ibg.edu.tr
Emre GÜRALP
MSc Student
emre.guralp@ibg.edu.tr
Arzu Beste DİLER
MSc Student
beste.diler@ibg.edu.tr
Nidanur IŞIN
MSc Student
nidanur.isin@ibg.edu.tr
Berfin ARLI
MSc Student
berfin.arli@ibg.edu.tr
Giray Nuri MAVİŞ
Undergraduate Student
giray.mavis@std.ibg.edu.tr
Şevval Ukde TAŞKIN
Undergraduate Student
None
Selected Publications
Turker Burhan M, Ersoy N, Bagriyanik HA, Tozburun S. Guide mapping for effective superficial photothermal coagulation of the esophagus using computer simulations with ex vivo sheep model validation study.. Lasers in surgery and medicine. 2022 October ; 54 (8) : 1116-1129. doi:10.1002/lsm.23595. Download
İbrahim Akkaya; Serhat Tozburun. A 1060 nm stretched-pulse mode-locked wavelength-swept laser source providing an A-scan rate of 20 MHz. Optik. 2022 September ; 266 : 169648. doi:10.1016/j.ijleo.2022.169648. Download
Yetis O, Guner O, Akkaya I, Guneli E, Bagriyanik A, Tozburun S. Vagus nerve bundle stimulation using 1505-nm laser irradiation in an in-vivo rat model.. Journal of biophotonics. 2021 September : e202100197. doi:10.1002/jbio.202100197. Download
Tozburun S. Superficial photothermal laser ablation of ex vivo sheep esophagus using a cone-shaped optical fiber tip.. Journal of biophotonics. 2020 June ; 13 (6) : e201960116. doi:10.1002/jbio.201960116. Download
Siddiqui M, Nam AS, Tozburun S, Lippok N, Blatter C, Vakoc BJ. High-speed optical coherence tomography by circular interferometric ranging. Nature photonics. 2018 February ; 12 (2) : 111-116. doi:10.1038/s41566-017-0088-x. Download
Tozburun S, Blatter C, Siddiqui M, Meijer EFJ, Vakoc BJ. Phase-stable Doppler OCT at 19 MHz using a stretched-pulse mode-locked laser. Biomedical Optics Express. 2018 March ; 9 (3) : 952-961. doi:10.1364/BOE.9.000952. Download
Tokel O, Turnali A, Makey G, Elahi P, Çolakoğlu T, Ergeçen E, Yavuz Ö, Hübner R, Borra MZ, Pavlov I, Bek A, Turan R, Kesim DK, Tozburun S, Ilday ....... In-chip microstructures and photonic devices fabricated by nonlinear laser lithography deep inside silicon. Nature Photonics. 2017 September ; 11 (10) : 639-645. doi:10.1038/s41566-017-0004-4. Download
Total : 7
Selected Proceedings
Merve Türker-Burhan, Nevin Ersoy, Husnu Bagriyanik, Serhat Tozburun 2023, 'Optimization study of parameters for laser-induced thermal treatment of the esophageal mucosal layer', European Conference on Biomedical Optics, Munich, Germany, June 25, 2023 .
Merve Türker-Burhan, Serhat Tozburun 2023, 'An endoscopic approach to limit the depth of laser-induced thermal injury', European Conference on Biomedical Optics, Munich, Germany, June 25, 2023 .
Emirhan Tosun, Omer Faruk Dinc, Berfin Arli, Serhat Tozburun 2023, 'A classifier for dynamic thermal imaging', European Conference on Biomedical Optics, Munich, Germany, June 25, 2023 .
Omer Faruk Dinc, Berfin Arli, and Serhat Tozburun 2023, 'An AI-based algorithmic system that predicts missing A-scans in crosssectional retinal images', European Conference on Biomedical Optics, Munich, Germany, June 25, 2023 .
Berfin Arli, Omer Faruk Dinc, Merve Burhan Turker, and Serhat Tozburun 2023, 'Predicting dark-field images of H&E-stained esophageal specimens', European Conference on Biomedical Optics, Munich, Germany, June 25, 2023 .
Merve Turker-Burhan; Serhat Tozburun 2022, 'An endoscopy capsule for well-confined and angle-controlled photothermal mucosa ablation', Optical Interactions with Tissue and Cells XXXIII, San Francisco, Feb. 21, 2022 . Download
Ibrahim Akkaya; Serhat Tozburun 2022, 'A stretched-pulse mode-locked (SPML) wavelength-swept laser source at 1.06 µm', Laser Resonators, Microresonators, and Beam Control XXIV, San Francisco, Feb. 21, 2022 . Download
Hanife Gokkan; Serhat Tozburun 2022, 'A customized scope head for OCT-guided laser stimulation of the vagus nerve', Optics and Biophotonics in Low-Resource Settings VIII, San Francisco, Oct. 21, 2022 . Download
Ibrahim AKKAYA, Serhat TOZBURUN 2021, 'An 18.6 MHz wavelength-swept laser source based on stretched-pulse mode-locking at 1290 nm', SPIE Photonics West, Munich, Germany (online), June 20, 2021 . Download
Merve TURKER BURHAN, Husnu Alper BAGRIYANIK, Serhat TOZBURUN 2021, 'Ex-vivo model experimental and simulation results suggesting effective and superficial mucosal photothermal ablation at 1505 nm', SPIE Photonics West, Munich, Germany (online), June 20, 2021 . Download
Ozan YETIS, Ibrahim AKKAYA, Ozge GUNER, Ensari GUNELI, Serhat TOZBURUN 2021, 'Arterial pressure responses of a rat to laser stimulation of the vagus nerve using infrared irradiation in continuous-wave mode', SPIE Photonics West, Munich, Germany (online), June 20, 2021 . Download
Ibrahim Akkaya, Onur Caki, Serhat Tozburun 2020, 'A stretched-pulse mode-locked laser source at a central wavelength of 1275 nm', SPIE Photonics West, San Francisco, Feb. 5, 2020 . Download
Ibrahim Akkaya, Serhat Tozburun 2020, 'An optical pulse generation technique using two optical phase modulators and a Fabry-Perot etalon', SPIE Photonics West, San Francisco, Feb. 4, 2020 . Download
Ozan Yetis, Ibrahim Akkaya, Asli Celik, Basar Koc, M. Ensari Guneli, Serhat Tozburun 2020, 'A pilot study: infrared laser stimulation of the rat vagus nerves', SPIE Photonics West, San Francisco, Feb. 3, 2020 . Download
Merve Turner Burhan, Serhat Tozburun 2020, 'Monte-Carlo based simulations of photothermal response of nerve tissue for laser wavelengths of 1455 nm, 1490 nm, 1550 nm', SPIE Photonics West, San Francisco, Feb. 3, 2020 . Download
Mahmut Ozan Gokkan, Serhat Tozburun 2020, 'Automatic classification of melanocytic skin tumors based on hyperparameters optimized by cross-validation using support vector machines', SPIE Photonics West, San Francisco, May 2, 2020 . Download
Merve Türker and Serhat Tozburun 2019, 'Simulations for modeling the photothermal response of nerve tissue', European Conference on Biomedical Optics, Munich, Germany, June 20, 2019 . Download
Total : 17
Projects
The Scientific and Technological Research Council of Turkey - TUBITAK - RD : Development of Optical-Domain Subsampling Based Optical Coherence Tomography Using a Wavelenght Stepped Laser With Two Phase Modulators And Chromatic Dispersion, Finished
The Scientific and Technological Research Council of Turkey - TUBITAK - RD : All fiber optics, 20-MHz wavelength-swept laser for Optical Coherence Tomography, Finished
The Scientific and Technological Research Council of Turkey - TUBITAK - RD : Development of a New Generation Apparatus Providing Limited Photothermal Ablation, Finished
European Union - RD : Well-Confined Mucosal LasEr Ablation with a Negative Pressure Based Endoscopy Capsule, Finished
The Scientific and Technological Research Council of Turkey - TUBITAK - RD : ENABLE: Endoscopic Mucosa Ablation Device for Barrett’s Esophagus Using Infrared Lasers., Finished
The Scientific and Technological Research Council of Turkey - TUBITAK - RD : Development of Optical Coherence Tomography Guided Optical Nerve Stimulation System, Ongoing
Health Institutes of Turkey- TUSEB - RD : An endoscopic cap for non-thermal mucosal ablation with accurate ablation limits, Ongoing
Patents
- Serhat Tozburun ve İbrahim Akkaya 2021 , OPTİK DARBE ÜRETMEK İÇİN OPTİK FAZ MODÜLASYONU, OPTİK FAZ GERİ-MODÜLASYONU VE SPEKTRAL OPTİK FİLTRELEME KULLANAN YÖNTEM VE CİHAZ, 2020 13928
- Serhat Tozburun 2021 , TARAMALAR ARASI GENİŞ VE DİNAMİK BİR ZAMAN ARALIĞI ÜRETMEK İÇİN NİTELİĞİ DEĞİŞTİRİLMİŞ ELEKTRİKSEL DALGALAR TEMELLİ YÜZEY TARAMA DESENİ/PROTOKOLÜ KULLANAN SİSTEM VE YÖNTEM, 2021 01197
- Serhat Tozburun, Merve Turker-Burhan, Ender Ellidokuz 2021 , SINIRLARI TANIMLI ANORMAL MUKOZAL DOKU ABLASYONU İÇİN NEGATİF BASINÇ TEMELLİ GÖRÜNTÜLEME VE TEDAVİ APARATI VE SİSTEMİ VE SİSTEMİN ÇALIŞMA YÖNTEMİ, None
- Benjamin Vakoc, Meena Siddiqui ve Serhat Tozburun 2018 , System, apparatus and method for utilizing optical dispersion for fourier-domain optical coherence tomography, US10058250B2; US10966613B2; WO2015013651A2; ES2893237T3; EP3025173B1
Awards
- Science Academy’s Young Scientist Awards Program (BAGEP) by Science Academy, 2020
- Above-Threshold Award by TUBITAK, 2018
- Young Investigator (GEBİP) Awards by Turkish Academy of Sciences (TÜBA), 2018
- Seal of Excellence Award by Marie Skłodowska-Curie Actions, 2017
- Eser Tümen Investigation Award by FABED, 2016
- 2232 Yurda Dönüş Araştırmacı Dolaşım Programı by TUBITAK, 2016
- 2236 Co-Funded Brain Circulation Scheme by Marie Skłodowska-Curie Actions, 2016
Academic Memberships
- American Physical Society, 2011
- IEEE Photonics Society, 2010
- INSTITUTE OF ELECTRICAL AND ELECTRONIC ENGINEERS (IEEE), 2009
- INTERNATIONAL SOCIETY FOR OPTICS AND PHOTONICS (SPIE), 2008
- Optical Society of America (OSA), 2007
- Marie Skłodowska-Curie Actions, 2019
Contact
Tozburun Lab. on Biophotonics and Optical Imaging
Research Group Leader
Serhat TOZBURUN
serhat.tozburun@ibg.edu.tr
+90 232 299 41 00
(5101)
+9
0 232 299 41 60