Bilimsel Yayınlar - 2021

İBG Afiliasyonlu: 102

Fanfan Hao, Seyit Kale, Stefan Dimitrov, Jeffrey J Hayes. Unraveling linker histone interactions in nucleosomes. Current Opinion in Structural Biology. 2021 December; 71: 87-93. doi:10.1016/j.sbi.2021.06.001.

Hani Alotaibi. Transcriptional impact of E-cadherin loss on embryonic stem cells. Jordan Journal of Biological Sciences. 2021 December; 14 (5). doi:10.54319/jjbs/140524.

Tugce Batur, Ayse Argundogan, Umur Keles, Zeynep Mutlu, Hani Alotaibi, Serif Senturk, Mehmet Ozturk. AXL knock-out in SNU475 hepatocellular carcinoma cells provides evidence for lethal effect associated with G2 arrest and polyploidization. International Journal of Molecular Sciences. 2021 December; 22 (24): 13247. doi:10.3390/ijms222413247.

Oveisi M, Shukla M, Seymen N, Ohno M, Taniguchi Y, Nahata S, Loos R, Mufti GJ, Allshire RC, Dimitrov S, Karimi MM. iNucs: Inter-Nucleosome Interactions. Bioinformatics (Oxford, England). 2021 December; 37 (23): 4562-4563. doi:10.1093/bioinformatics/btab698.

Engur D, Kumral A. New perpective for an old problem: extracellular vesicle based management of respiratory distress syndrome. Drug delivery. 2021 December; 28 (1): 2310-2312. doi:10.1080/10717544.2021.1995079.

Eray A, Erkek-Özhan S. Classification of bladder cancer cell lines according to regulon activity. Turkish journal of biology = Turk biyoloji dergisi. 2021 December; 45 (6): 656-666. doi:10.3906/biy-2107-72.

Kuruş M, Akbari S, Eskier D, Bursalı A, Ergin K, Erdal E, Karakülah G. Transcriptome Dynamics of Human Neuronal Differentiation From iPSC. Frontiers in cell and developmental biology. 2021 December; 9: 727747. doi:10.3389/fcell.2021.727747.

Ayvaz I, Sunay D, Sariyar E, Erdal E, Karagonlar ZF. Three-Dimensional Cell Culture Models of Hepatocellular Carcinoma - a Review. Journal of gastrointestinal cancer. 2021 December. doi:10.1007/s12029-021-00772-1.

Pavlopoulou A, Asfa S, Gioukakis E, Mavragani IV, Nikitaki Z, Takan I, Pouget JP, Harrison L, Georgakilas AG. In Silico Investigation of the Biological Implications of Complex DNA Damage with Emphasis in Cancer Radiotherapy through a Systems Biology Approach. Molecules (Basel, Switzerland). 2021 December; 26 (24). doi:10.3390/molecules26247602.

Kemal Ugur Tufekci, Bedir Irem Eltutan, Kamer Burak Isci, Sermin Genc. Resveratrol Inhibits NLRP3 Inflammasome-Induced Pyroptosis and miR-155 Expression in Microglia Through Sirt1/AMPK Pathway. Neurotoxicity Research. 2021 November. doi:10.1007/s12640-021-00435-w.

Ekin U, Yuzugullu H, Ozen C, Korhan P, Bagirsakci E, Yilmaz F, Yuzugullu OG, Uzuner H, Alotaibi H, Kirmizibayrak PB, Atabey N, Karakülah G, Ozturk M. Evaluation of ATAD2 as a Potential Target in Hepatocellular Carcinoma. Journal of gastrointestinal cancer. 2021 November. doi:10.1007/s12029-021-00732-9.

Bora Tastan, Burak I. Arioz, Kemal Ugur Tufekci, Emre Tarakcioglu, Ceren Perihan Gonul, Kursad Genc, Sermin Genc. Dimethyl Fumarate Alleviates NLRP3 Inflammasome Activation in Microglia and Sickness Behavior in LPS-Challenged Mice. Frontiers in Immunology. 2021 November; 12: 4736. doi:10.3389/fimmu.2021.737065.

Korhan P, Tercan Avcı S, Yılmaz Y, Öztemur Islakoğlu Y, Atabey N. Role of Biobanks for Cancer Research and Precision Medicine in Hepatocellular Carcinoma. Journal of gastrointestinal cancer. 2021 November. doi:10.1007/s12029-021-00759-y.

Kisa PT, Uzun OU, Gunduz M, Bulbul FS, Kose E, Arslan N. Frequency and status of depression and anxiety in mothers of children with inborn errors of metabolism with restricted diet, with and without risk of metabolic crises. Archives de pediatrie : organe officiel de la Societe francaise de pediatrie. 2021 November; 28 (8): 702-706. doi:10.1016/j.arcped.2021.09.008.

Cagatay E, Akyildiz V, Ergun Y, Kayali HA. Synthesis of Murrayaquinone-A Derivatives and Investigation of Potential Anticancer Properties. Chemistry & biodiversity. 2021 November; 18 (11): e2100348. doi:10.1002/cbdv.202100348.

Kurul SH, Oktay Y, Töpf A, Szabó NZ, Güngör S, Yaramis A, Sonmezler E, Matalonga L, Yis U, Schon K, Paramonov I, Kalafatcilar İP, Gao F, Rieger A, Arslan N, Yilmaz E, Ekinci B, Edem PP, Aslan M, Özgör B, Lochmüller A, Nair A, O'Heir E, Lovgren AK, Broad Center for Mendelian Genomics., Maroofian R, Houlden H, Polavarapu K, Roos A, Müller JS, Hathazi D, Chinnery PF, Laurie S, Beltran S, Lochmüller H, Horvath R. High diagnostic rate of trio exome sequencing in consanguineous families with neurogenetic diseases. Brain : a journal of neurology. 2021 November. doi:10.1093/brain/awab395.

Teke Kisa P, Eroglu Erkmen S, Bahceci H, Arslan Gulten Z, Aydogan A, Karalar Pekuz OK, Yuce Inel T, Ozturk T, Uysal S, Arslan N. Efficacy of Phenylalanine- and Tyrosine-Restricted Diet in Alkaptonuria Patients on Nitisinone Treatment: Case Series and Review of Literature. Annals of nutrition & metabolism. 2021 November: 1-13. doi:10.1159/000519813.

Raje S, Reddy N, Jerbi H, Randhawa P, Tsaramirsis G, Shrivas NV, Pavlopoulou A, Stojmenović M, Piromalis D. Applications of Healthcare Robots in Combating the COVID-19 Pandemic. Applied bionics and biomechanics. 2021 November; 2021: 7099510. doi:10.1155/2021/7099510.

Circir A, Koksal Bicakci G, Savas B, Doken DN, Henden ŞO, Can T, Karaca E, Erson-Bensan AE. A C-term truncated EIF2Bγ protein encoded by an intronically polyadenylated isoform introduces unfavorable EIF2Bγ-EIF2γ interactions. Proteins. 2021 November. doi:10.1002/prot.26284.

Kostandinos Tsaramirsis, Akshet Patel, Pranav Sharma, Nikunj Reddy, Princy Randhawa, Georgios Tsaramirsis, Athanasia Pavlopoulou, Zeynep A. Koçer and Dimitrios Piromalis. Bio-Virus Spread Simulation in Real 3D Space using Augmented Reality. Engineered Science. 2021 November; 16: 319-330. doi:10.30919/es8d592.

Arif E. Cetin, Zeynep A. Kocer, Seda Nur Topkaya, Ziya Ata Yazici. Handheld Plasmonic Biosensor for Virus Detection in Field-Settings. Sensors and Actuators B: Chemical. 2021 October; 344: 130301. doi:10.1016/j.snb.2021.130301.

Gökhan Karakülah, Cİhangir Yandım. Identification of differentially expressed genomic repeats in primary hepatocellular carcinoma and their potential links to biological processes and survival. Turkish Journal of Biology. 2021 October; 45: 599-612. doi:10.3906/biy-2104-13.

Kiser C, Gonul CP, Olcum M, Genc S. Inhibitory effects of sulforaphane on NLRP3 inflammasome activation. Molecular immunology. 2021 October; 140: 175-185. doi:10.1016/j.molimm.2021.10.014.

Ozhan, G. Editorial: Wnt Signaling at the Plasma Membrane: Activation, Regulation and Disease Connection. Frontiers in Cell and Developmental Biology. 2021 October; 9: 2994. doi:10.3389/fcell.2021.780163.

Karabicici M, Azbazdar Y, Iscan E, Ozhan G. Misregulation of Wnt Signaling Pathways at the Plasma Membrane in Brain and Metabolic Diseases. Membranes. 2021 October; 11 (11): 844. doi:10.3390/membranes11110844.

Utine CA, Kaya M, Kasal K. Wide-field vitreoretinal surgery in eyes with Boston type 1 keratoprosthesis. International ophthalmology. 2021 October. doi:10.1007/s10792-021-02083-7.

Richard EM, Bakhtiari S, Marsh APL, Kaiyrzhanov R, Wagner M, Shetty S, Pagnozzi A, Nordlie SM, Guida BS, Cornejo P, Magee H, Liu J, Norton BY, Webster RI, Worgan L, Hakonarson H, Li J, Guo Y, Jain M, Blesson A, Rodan LH, Abbott MA, Comi A, Cohen JS, Alhaddad B, Meitinger T, Lenz D, Ziegler A, Kotzaeridou U, Brunet T, Chassevent A, Smith-Hicks C, Ekstein J, Weiden T, Hahn A, Zharkinbekova N, Turnpenny P, Tucci A, Yelton M, Horvath R, Gungor S, Hiz S, Oktay Y, Lochmuller H, Zollino M, Morleo M, Marangi G, Nigro V, Torella A, Pinelli M, Amenta S, Husain RA, Grossmann B, Rapp M, Steen C, Marquardt I, Grimmel M, Grasshoff U, Korenke GC, Owczarek-Lipska M, Neidhardt J, Radio FC, Mancini C, Claps Sepulveda DJ, McWalter K, Begtrup A, Crunk A, Guillen Sacoto MJ, Person R, Schnur RE, Mancardi MM, Kreuder F, Striano P, Zara F, Chung WK, Marks WA, van Eyk CL, Webber DL, Corbett MA, Harper K, Berry JG, MacLennan AH, Gecz J, Tartaglia M, Salpietro V, Christodoulou J, Kaslin J, Padilla-Lopez S, Bilguvar K, Munchau A, Ahmed ZM, Hufnagel RB, Fahey MC, Maroofian R, Houlden H, Sticht H, Mane SM, Rad A, Vona B, Jin SC, Haack TB, Makowski C, Hirsch Y, Riazuddin S, Kruer MC. Bi-allelic variants in SPATA5L1 lead to intellectual disability, spastic-dystonic cerebral palsy, epilepsy, and hearing loss. American journal of human genetics. 2021 October; 108 (10): 2006-2016. doi:10.1016/j.ajhg.2021.08.003.

Saniye Gul Kaya, Seniz Inanc-Surer, Gulcin Cakan-Akdogan, Gulgun Oktay, Canan Asli Utine, Sibel Kalyoncu. Roles of matrix metalloproteinases in the cornea: A special focus on macular corneal dystrophy. Medicine in Drug Discovery. 2021 September; 11: 100095. doi:10.1016/j.medidd.2021.100095.

Yılmaz H, Toy HI, Marquardt S, Karakülah G, Küçük C, Kontou PI, Logotheti S, Pavlopoulou A. In Silico Methods for the Identification of Diagnostic and Favorable Prognostic Markers in Acute Myeloid Leukemia. International journal of molecular sciences. 2021 September; 22 (17): 9601. doi:10.3390/ijms22179601.

Özbek Y, Fide E, Yener GG. Resting-state EEG alpha/theta power ratio discriminates early-onset Alzheimer's disease from healthy controls. Clinical neurophysiology : official journal of the International Federation of Clinical Neurophysiology. 2021 September; 132 (9): 2019-2031. doi:10.1016/j.clinph.2021.05.012.

Yetis O, Guner O, Akkaya I, Guneli E, Bagriyanik A, Tozburun S. Vagus nerve bundle stimulation using 1505-nm laser irradiation in an in-vivo rat model. Journal of biophotonics. 2021 September: e202100197. doi:10.1002/jbio.202100197.

Karabicici M, Azbazdar Y, Ozhan G, Senturk S, Firtina Karagonlar Z, Erdal E. Changes in Wnt and TGF-β Signaling Mediate the Development of Regorafenib Resistance in Hepatocellular Carcinoma Cell Line HuH7. Frontiers in cell and developmental biology. 2021 August; 9: 639779. doi:10.3389/fcell.2021.639779.

Kokturk M, Yıldırım S, Nas MS, Ozhan G, Atamanalp M, Bolat I, Calimli MH, Alak G. Investigation of the Oxidative Stress Response of a Green Synthesis Nanoparticle (RP-Ag/ACNPs) in Zebrafish. Biological trace element research. 2021 August. doi:10.1007/s12011-021-02855-3.

Ozden B, Kryshtafovych A, Karaca E. Assessment of the CASP14 assembly predictions. Proteins. 2021 August. doi:10.1002/prot.26199.

Zeynep Güngör, Merve Uysal, Mehmet Öztürk, Şerif Şentürk. Systematic Analysis of Cytostatic TGF-Beta Response in Mesenchymal-Like Hepatocellular Carcinoma Cell Lines. Journal of Gastrointestinal Cancer. 2021 August. doi:10.1007/s12029-021-00704-z.

Geronikolou SA, Pavlopoulou A, Chrousos GP, Cokkinos DV. Interactions Networks for Primary Heart Sarcomas. Cancers. 2021 August; 13 (15): 3882. doi:10.3390/cancers13153882.

Theofylaktou D, Takan I, Karakülah G, Biz GM, Zanni V, Pavlopoulou A, Georgakilas AG. Mining Natural Products with Anticancer Biological Activity through a Systems Biology Approach. Oxidative medicine and cellular longevity. 2021 August; 2021: 9993518. doi:10.1155/2021/9993518.

Louka A, Takan I, Pavlopoulou A, Georgakilas AG. Bioinformatic approaches to the investigation of the atavistic genes implicated in cancer. Frontiers in bioscience (Landmark edition). 2021 August; 26 (8): 279-311. doi:10.52586/4944.

Kemal Ugur Tufekci, Jens Allmer, Kürşat Bora Çarman, Erhan Bayram, Yasemin Topçu, Semra Hız, Şermin Genç, Uluç Yiş. Antiviral microRNA expression signatures are altered in subacute sclerosing panencephalitis. Neurological Sciences and Neurophysiology. 2021 August; 38 (3): 166-172. doi:10.4103/nsn.nsn_57_21.

Babiloni C, Ferri R, Noce G, Lizio R, Lopez S, Lorenzo I, Tucci F, Soricelli A, Nobili F, Arnaldi D, Famà F, Orzi F, Buttinelli C, Giubilei F, Cipollini V, Marizzoni M, Güntekin B, Aktürk T, Hanoğlu L, Yener G, Özbek Y, Stocchi F, Vacca L, Frisoni GB, Del Percio C. Resting State Alpha Electroencephalographic Rhythms Are Differently Related to Aging in Cognitively Unimpaired Seniors and Patients with Alzheimer's Disease and Amnesic Mild Cognitive Impairment. Journal of Alzheimer's disease : JAD. 2021 August; 82 (3): 1085-1114. doi:10.3233/JAD-201271.

Güntekin B, Aktürk T, Arakaki X, Bonanni L, Del Percio C, Edelmayer R, Farina F, Ferri R, Hanoğlu L, Kumar S, Lizio R, Lopez S, Murphy B, Noce G, Randall F, Sack AT, Stocchi F, Yener G, Yıldırım E, Babiloni C. Are there consistent abnormalities in event-related EEG oscillations in patients with Alzheimer's disease compared to other diseases belonging to dementia?. Psychophysiology. 2021 August: e13934. doi:10.1111/psyp.13934.

Gurer DC, Erdogan İ, Ahmadov U, Basol M, Sweef O, Cakan-Akdogan G, Akgül B. Transcriptomics Profiling Identifies Cisplatin-Inducible Death Receptor 5 Antisense Long Non-coding RNA as a Modulator of Proliferation and Metastasis in HeLa Cells. Frontiers in cell and developmental biology. 2021 August; 9: 2248. doi:10.3389/fcell.2021.688855.

Seda Nur Topkaya, Ezgi Turunc, Arif E. Cetin. Multi-Walled Carbon Nanotubes and Gold Nanorod Decorated Biosensor for Detection of microRNA-126. Electroanalysis. 2021 July. doi:10.1002/elan.202100198.

Koçhan N, Eskier D, Suner A, Karakülah G, Oktay Y. Different selection dynamics of S and RdRp between SARS-CoV-2 genomes with and without the dominant mutations. Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases. 2021 July; 91: 104796. doi:10.1016/j.meegid.2021.104796.

Okay K, Varış PÜ, Miral S, Ekinci B, Yaraş T, Karakülah G, Oktay Y. Alternative splicing and gene co-expression network-based analysis of dizygotic twins with autism-spectrum disorder and their parents. Genomics. 2021 July; 113 (4): 2561-2571. doi:10.1016/j.ygeno.2021.05.038.

Moumoulidis PT, Pavlopoulou A, Ünal R, Mavragani I, Georgakilas AG, Kyrodimos E. Nodal tumor volume as a prognostic factor for head and neck squamous cell carcinoma: a systematic review. Frontiers in bioscience (Landmark edition). 2021 July; 26 (7): 235-245. doi:10.52586/4937.

Bürhan-Çavuşoğlu P, İscan E, Güneş A, Atabey N, Alkın T. Increased telomerase activity in major depressive disorder with melancholic features: Possible role of pro-inflammatory cytokines and the brain-derived neurotrophic factor. Brain, behavior, & immunity - health. 2021 July; 14: 100259. doi:10.1016/j.bbih.2021.100259.

Şeker M, Özbek Y, Yener G, Özerdem MS. Complexity of EEG Dynamics for Early Diagnosis of Alzheimer's Disease Using Permutation Entropy Neuromarker. Computer methods and programs in biomedicine. 2021 July; 206: 106116. doi:10.1016/j.cmpb.2021.106116.

Alper M, Aydemir T, Köçkar F. [USF1 Suppresses Expression of Fibrillar Type I, II, and III Collagen and pNP Adamts-3 in Osteosarcoma Cells]. Molekuliarnaia biologiia. 2021 July; 55 (4): 634-642. doi:10.31857/S0026898421040030.

Babiloni C, Arakaki X, Bonanni L, Bujan A, Carrillo MC, Del Percio C, Edelmayer RM, Egan G, Elahh FM, Evans A, Ferri R, Frisoni GB, Güntekin B, Hainsworth A, Hampel H, Jelic V, Jeong J, Kim DK, Kramberger M, Kumar S, Lizio R, Nobili F, Noce G, Puce A, Ritter P, Smit DJA, Soricelli A, Teipel S, Tucci F, Sachdev P, Valdes-Sosa M, Valdes-Sosa P, Vergallo A, Yener G. EEG measures for clinical research in major vascular cognitive impairment: recommendations by an expert panel. Neurobiology of aging. 2021 July; 103: 78-97. doi:10.1016/j.neurobiolaging.2021.03.003.

Akbari S, Kunter İ, Azbazdar Y, Ozhan G, Atabey N, Karagonlar ZF, Erdal E. LGR5/R-Spo1/Wnt3a axis promotes stemness and aggressive phenotype in hepatoblast-like hepatocellular carcinoma cell lines. Cellular signalling. 2021 June: 109972. doi:10.1016/j.cellsig.2021.109972.

Maryam Daneshpour, Zhina Mazhari, Melika Haji Mohammadi, Arif E. Cetin, Maedeh Khodamoradi, Amir Reza Aref, Mostafa Azimzadeh, and Seda Nur Topkaya. Review of Current Diagnostics Developed for COVID-19. Analytical and Bioanalytical Chemistry Research. 2021 June; 8 (4): 417-444. doi:10.22036/ABCR.2021.271340.1593.

Arioz BI, Tufekci KU, Olcum M, Durur DY, Akarlar BA, Ozlu N, Bagriyanik HA, Keskinoglu P, Yener G, Genc S. Proteome profiling of neuron-derived exosomes in Alzheimer's disease reveals hemoglobin as a potential biomarker. Neuroscience letters. 2021 June; 755: 135914. doi:10.1016/j.neulet.2021.135914.

Marquardt S, Pavlopoulou A, Takan I, Dhar P, Pützer BM, Logotheti S. A Systems-Based Key Innovation-Driven Approach Infers Co-option of Jaw Developmental Programs During Cancer Progression. Frontiers in cell and developmental biology. 2021 June; 9: 682619. doi:10.3389/fcell.2021.682619.

Burak Ibrahim Arioz, Emre Tarakcioglu, Melis Olcum , Sermin Genc. The Role of Melatonin on NLRP3 Inflammasome Activation in Diseases. Antioxidants. 2021 June; 10 (7): 1020. doi:10.3390/antiox10071020.

Karakulak T, Rifaioglu AS, Rodrigues JPGLM, Karaca E. Predicting the Specificity- Determining Positions of Receptor Tyrosine Kinase Axl. Frontiers in Molecular Biosciences. 2021 June (8:658906). doi:10.3389/fmolb.2021.658906.

Özkan M, Eskiocak YC, Wingender G. Macrophage and dendritic cell subset composition can distinguish endotypes in adjuvant-induced asthma mouse models. PloS one. 2021 June; 16 (6): e0250533. doi:10.1371/journal.pone.0250533.

Utine CA, Birlik M, Özizmirliler D, Karakaş A, Akbulut B, Durak I. TNF-α Inhibitors for the Management of Intractable Corneal Melt: Report of Three Cases and Review of the Literature. Eye & contact lens. 2021 June; 47 (6): 372-377. doi:10.1097/ICL.0000000000000770.

Hasan Akbaba, Gülşah Erel-Akbaba, Serif Senturk. Recruitment of solid lipid nanoparticles for the delivery of CRISPR/Cas9: primary evaluation of anticancer gene editing. Nanomedicine. 2021 May; 16 (12): 963–978. doi:10.2217/nnm-2020-0412.

Topel H, Bağırsakçı E, Yılmaz Y, Güneş A, Bağcı G, Çömez D, Kahraman E, Korhan P, Atabey N. High glucose induced c-Met activation promotes aggressive phenotype and regulates expression of glucose metabolism genes in HCC cells. Scientific Reports. 2021 May; 11 (1): 11376. doi:10.1038/s41598-021-89765-5.

Ayca Karasakal, Sulinay Parlar, Vildan Alptuzun, Arif E. Cetin, and Seda Nur Topkaya. A Novel Molecule: 1-(2,6 dichlorobenzyl)-4-(2-(2-4-hydroxybenzylidene)hydrazinyl)pyridinium chloride and its Interaction with DNAA Novel Molecule: 1-(2,6 dichlorobenzyl)-4-(2-(2-4-hydroxybenzylidene)hydrazinyl)pyridinium chloride and its Interaction with DNA. ELECTROANALYSIS. 2021 May. doi:10.1002/elan.202060597.

Arif E. Cetin, Seda Nur Topkaya, Ozden Yalcin-Ozuysal, Ali Khademhosseini. Refractive Index Sensing For Measuring Single Cell Growth. ACS NANO. 2021 May. doi:10.1021/acsnano.1c04031.

Tufekci KU, Ercan I, Isci KB, Olcum M, Tastan B, Gonul CP, Genc K, Genc S. Sulforaphane inhibits NLRP3 inflammasome activation in microglia through Nrf2-mediated miRNA alteration. Immunology letters. 2021 May. doi:10.1016/j.imlet.2021.03.004.

M Olcum, KU Tufekci, DY Durur, B Tastan, IN Gokbayrak, K Genc, S Genc. Ethyl Pyruvate Attenuates Microglial NLRP3 Inflammasome Activation via Inhibition of HMGB1/NF-κB/miR-223 Signaling. Antioxidants. 2021 May; 10 (5): 745. doi:10.3390/antiox10050745.

Gorkem Liman, Emrecan Yildiz, Hasan Ilhan, Arif E. Cetin, Gokhan Demirel. Hot-Spot Engineering Through Soft Actuators for Surface-Enhanced Raman Spectroscopy (SERS) Applications. ADVANCED OPTICAL MATERIALS. 2021 May. doi:10.1002/adom.202100009.

Kemal Ugur Tufekci, Begum Alural, Emre Tarakcioglu, Tugba San, Sermin Genc. Lithium inhibits oxidative stress-induced neuronal senescence through miR-34a. Molecular Biology Reports. 2021 May. doi:10.1007/s11033-021-06430-w.

Dhasmana D, Veerapathiran S, Azbazdar Y, Nelanuthala AVS, Teh C, Ozhan G, Wohland T. Wnt3 Is Lipidated at Conserved Cysteine and Serine Residues in Zebrafish Neural Tissue. Frontiers in cell and developmental biology. 2021 May; 9: 671218. doi:10.3389/fcell.2021.671218.

Geronikolou SA, Pavlopoulou A, Cokkinos DV, Bacopoulou F, Chrousos GP. Polycystic οvary syndrome revisited: An interactions network approach. European journal of clinical investigation. 2021 May. doi:10.1111/eci.13578.

Özkan M, Eskiocak YC, Wingender G. The IL-10GFP (VeRT-X) mouse strain is not suitable for the detection of IL-10 production by granulocytes during lung inflammation. PloS one. 2021 May; 16 (5): e0247895. doi:10.1371/journal.pone.0247895.

Kisa PT, Gunduz M, Dorum S, Uzun OU, Cakar NE, Yildirim GK, Erdol S, Hismi BO, Tugsal HY, Ucar U, Gorukmez O, Gulten ZA, Kucukcongar A, Bulbul S, Sari I, Arslan N. Alkaptonuria in Turkey: Clinical and molecular characteristics of 66 patients. European journal of medical genetics. 2021 May; 64 (5): 104197. doi:10.1016/j.ejmg.2021.104197.

Arredondo Eve A, Tunc E, Liu YJ, Agrawal S, Erbak Yilmaz H, Emren SV, Akyıldız Akçay F, Mainzer L, Žurauskienė J, Madak Erdogan Z. Identification of Circulating Diagnostic Biomarkers for Coronary Microvascular Disease in Postmenopausal Women Using Machine-Learning Techniques. Metabolites. 2021 May; 11 (6): 339. doi:10.3390/metabo11060339.

Baykal-Köse S, Efe H, Yüce Z. Autophagy Does Not Contribute to TKI Response in a Imatinib-resistant Chronic Myeloid Leukemia Cell Line. Molekuliarnaia biologiia. 2021 May; 55: 573-579. doi:10.31857/S0026898421040042.

Babiloni C, Ferri R, Noce G, Lizio R, Lopez S, Lorenzo I, Panzavolta A, Soricelli A, Nobili F, Arnaldi D, Famà F, Orzi F, Buttinelli C, Giubilei F, Cipollini V, Marizzoni M, Güntekin B, Aktürk T, Hanoğlu L, Yener G, Özbek Y, Stocchi F, Vacca L, Frisoni GB, Del Percio C. Abnormalities of Cortical Sources of Resting State Alpha Electroencephalographic Rhythms are Related to Education Attainment in Cognitively Unimpaired Seniors and Patients with Alzheimer's Disease and Amnesic Mild Cognitive Impairment. Cerebral cortex (New York, N.Y. : 1991). 2021 April; 31 (4): 2220-2237. doi:10.1093/cercor/bhaa356.

Köktürk M, Altindağ F, Ozhan G, Çalimli MH, Nas MS. Textile dyes Maxilon blue 5G and Reactive blue 203 induce acute toxicity and DNA damage during embryonic development of Danio rerio. Comparative biochemistry and physiology. Toxicology & pharmacology : CBP. 2021 April; 242: 108947. doi:10.1016/j.cbpc.2020.108947.

Yeni Wahyuni Hartati, Seda Nur Topkaya, Shabarni Gaffar, Husein Hernandi Bahti, Arif E. Cetin. Synthesis and Characterization of Nanoceria for Electrochemical Sensing Applications. RSC Advances. 2021 April; 11 (27): 16216-16235. doi:10.1039/D1RA00637A.

Toy HI, Karakülah G, Kontou PI, Alotaibi H, Georgakilas AG, Pavlopoulou A. Investigating Molecular Determinants of Cancer Cell Resistance to Ionizing Radiation Through an Integrative Bioinformatics Approach. Frontiers in cell and developmental biology. 2021 April; 9: 770. doi:10.3389/fcell.2021.620248.

Yavuz Mercan, Gladys Atim, Ahmed E. Kayed, M. Ekin Azbazdar, Ahmed Kandeil, Mohamed A. Ali, Adam Rubrum, Pamela McKenzie, Richard J. Webby, Bernard Erima, Fred Wabwire-Mangen, Qouilazoni A. Ukuli, Titus Tugume, Denis K. Byarugaba, Ghazi Kayali, Mariette F. Ducatez, and Zeynep A. Koçer. Molecular Characterization of Closely Related H6N2 Avian Influenza Viruses Isolated from Turkey, Egypt, and Uganda. Viruses. 2021 April; 13 (4): 607. doi:10.3390/v13040607.

Akkaya HÜ, Yılmaz HE, Narin F, Sağlam M. Evaluation of galectin-3, peptidylarginine deiminase-4 and tumor necrosis factor-α levels in gingival crevicular fluid for periodontal health, gingivitis and stage III grade C periodontitis: A pilot study. Journal of periodontology. 2021 April. doi:10.1002/JPER.21-0137.

Deniz Doğan; Merve Arslan; Tuğçe Uluçay; Sibel Kalyoncu; Stefan Dimitrov; Seyit Kale. CENP-A nucleosome is a sensitive allosteric scaffold for DNA and chromatin factors. Journal of Molecular Biology. 2021 March; 433 (6). doi:10.1016/j.jmb.2020.166789.

Huseyin Oguzhan Kaya, Arif E. Cetin, and Seda Nur Topkaya. Electrochemical Detection of Linagliptin and Its Interaction with DNA. Turkish Journal of Pharmaceutical Sciences. 2021 March. doi:10.4274/tjps.galenos.2021.71354.

Wang Y, Ba HJ, Wen XZ, Zhou M, Küçük C, Tamagnone L, Wei L, You H. A prognostic model for melanoma patients on the basis of immune-related lncRNAs. Aging. 2021 March; 13. doi:10.18632/aging.202730.

Kısa PT, Yildirim GK, Hismi BO, Dorum S, Kusbeci OY, Topak A, Baydan F, Celik FND, Gorukmez O, Gulten ZA, Ekici A, Ozkan S, Yaman A, Arslan N. Patients with cerebrotendinous xanthomatosis diagnosed with diverse multisystem involvement. Metabolic brain disease. 2021 March. doi:10.1007/s11011-021-00714-7.

Utine CA, Özizmirliler D, Kayabaşı M, Günenç Ü. The number of intracorneal ring segments in asymmetric and central cones. Eye and vision (London, England). 2021 March; 8 (1): 10. doi:10.1186/s40662-021-00234-6.

Limoncu H, Boz HE, Zygouris S, Tsolaki M, Giakoumis D, Votis K, Tzovaras D, Öztürk V, Yener GG. A Virtual Reality-Based Screening Test for Cognitive Impairment in Small Vessel Disease. Journal of Alzheimer's disease reports. 2021 March; 5 (1): 161-169. doi:10.3233/ADR-200257.

Muzaffer Dükel, Zehra Tavsan, Hülya Ayar Kayalı. Flavonoids regulate cancer-related cellular signalling via ROS in colon cancer. Process Biochemistry. 2021 February; 101: 11-25. doi:10.1016/j.procbio.2020.10.002.

Tüncel Ö, Kahraman E, Bağci G, Atabey N, Özçelik S. Engineered silica nanoparticles are biologically safe vehicles to deliver drugs or genes to liver cells. Materials science & engineering. C, Materials for biological applications. 2021 February; 119: 111585. doi:10.1016/j.msec.2020.111585.

Huseyin Oguzhan Kaya, Arif E. Cetin, Mostafa Azimzadeh, and Seda Nur Topkaya. Pathogen Detection with Electrochemical Biosensors: Advantages, Challenges and Future Perspectives. Journal of Electroanalytical Chemistry. 2021 February; 882 (1): 114989. doi:10.1016/j.jelechem.2021.114989.

Doğa Eskier, Evren Akalp, Özlem Dalan, Gökhan Karakülah, Yavuz Oktay. Current mutatome of SARS-CoV-2 in Turkey reveals mutations of interest. Turkish Journal of Biology. 2021 February; 45 (1): 104-113. doi:10.3906/biy-2008-56.

Karabicici M, Alptekin S, Fırtına Karagonlar Z, Erdal E. Doxorubicin-induced senescence promotes stemness and tumorigenicity in EpCAM-/CD133- non-stem cell population in hepatocellular carcinoma cell line, HuH-7. Molecular oncology. 2021 February. doi:10.1002/1878-0261.12916.

Evin Iscan, Umut Ekin, Gokhan Yildiz, Ozden Oz, Umur Keles, Aslı Suner, Gulcin Cakan-Akdogan, Gunes Ozhan, Marta Nekulova, Borivoj Vojtesek, Hamdiye Uzuner, Gökhan Karakülah, Hani Alotaibi and Mehmet Ozturk. TAp73β Can Promote Hepatocellular Carcinoma Dedifferentiation. Cancers. 2021 February; 13 (4): 783. doi:10.3390/cancers13040783.

Bora E, Can G, Zorlu N, Ulas G, Inal N, Ozerdem A. Structural dysconnectivity in offspring of individuals with bipolar disorder: The effect of co-existing clinical-high-risk for bipolar disorder. Journal of affective disorders. 2021 February; 281: 109-116. doi:10.1016/j.jad.2020.11.122.

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Zhou BR, Feng H, Kale S, Fox T, Khant H, de Val N, Ghirlando R, Panchenko AR, Bai Y. Distinct Structures and Dynamics of Chromatosomes with Different Human Linker Histone Isoforms. Molecular cell. 2021 January; 81 (1): 166-182.e6. doi:10.1016/j.molcel.2020.10.038.

Utine CA, Li G, Asbell P, Pflugfelder S, Akpek E. Ocular surface disease associated with dupilumab treatment for atopic diseases. The ocular surface. 2021 January; 19: 151-156. doi:10.1016/j.jtos.2020.05.008.

Dilara Demirci, Bengisu Dayanc, Fatma Aybuke Mazi, Serif Senturk. The Jekyll and Hyde of Cellular Senescence in Cancer. Cells. 2021 January; 10 (2): 208. doi:10.3390/cells10020208.

Ozgun Ozalp, Ozge Cark, Yagmur Azbazdar, Betul Haykir, Gokhan Cucun, Ismail Kucukaylak, Gozde Alkan-Yesilyurt, Erdinc Sezgin and Gunes Ozhan. Nradd acts as a negative feedback regulator of Wnt/ß-catenin signaling and promotes apoptosis. Biomolecules. 2021 January; 11 (1): 100. doi:10.3390/biom11010100.

Serdal Gungor, Yavuz Oktay, Semra Hiz, Álvaro Aranguren-Ibáñez, Ipek Kalafatcilar, Ahmet Yaramis, Ezgi Karaca, Uluc Yis, Ece Sonmezler, Burcu Ekinci, Mahmut Aslan, Elmasnur Yilmaz, Sunitha Balaraju, Nora Szabo, Steven Laurie, Sergi Beltran, Daniel G. MacArthur, Denisa Hathazi, Rita Horvath. Autosomal recessive variants in TUBGCP2 alter the γ-tubulin ring complex leading to neurodevelopmental disease. iScience. 2021 January; 24 (1). doi:10.1016/j.isci.2020.101948.

Yabalak E, Erdoğan Eliuz EA, Nazlı MD. Evaluation of Citrus reticulata essential oil: Chemical composition and antibacterial effectiveness incorporated gelatin on E. coli and S. aureus. International journal of environmental health research. 2021 January: 1-10. doi:10.1080/09603123.2021.1872059.

Azbazdar Y, Karabicici M, Erdal E, Ozhan G. Regulation of Wnt Signaling Pathways at the Plasma Membrane and Their Misregulation in Cancer. Frontiers in cell and developmental biology. 2021 January; 9: 631623. doi:10.3389/fcell.2021.631623.

Erguven M, Karakulak T, Diril MK, Karaca E. How Far Are We from the Rapid Prediction of Drug Resistance Arising Due to Kinase Mutations?. ACS omega. 2021 January; 6 (2): 1254-1265. doi:10.1021/acsomega.0c04672.

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