Advanced Imaging and Analysis Methods from Cell to Tissue — Beginner Level
An "Introductory Level from Cell to Tissue: Advanced Imaging and Analysis Methods" course will be held at the Izmir Biomedicine and Genome Center on Dec 1-2, 2026.
With this course, the participant will receive introductory fundamental knowledge from four different laboratories and will be able to: prepare routine histological sections from organ and tissue samples; experience the operational routine of confocal microscopy and super-resolution applications at a beginner level along with many associated details distinguish why scanning or transmission electron microscopy should be used in a study and interpret cell populations in flow cytometry outputs while analyzing the physical properties of cells and the molecular markers they carry.
Workshop Modules
This introductory training aims to demystify complex analysis methods through practical, hands-on sessions:
Application Form: https://forms.gle/w6NBhMfm4HCxnpBi8
Program Schedule
DAY 1 (Theory & Practice): Fundamental principles of Histopathology and Electron Microscopy, operational mechanisms of instrumentation, contemporary application fields, and hands-on practical experience in the laboratory and with the equipment.
DAY 2 (Theory & Practice): Fundamental principles of Flow Cytometry and Optical Imaging, operational mechanisms of instrumentation, contemporary application fields, and hands-on practical experience in the laboratory and with the equipment
SCHEDULE
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1.Gün |
1 Aralık Salı |
|
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08:30-09.00 |
Açılış & Kayıt |
3. Kat Desk |
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09:00-09:30 |
Araştırma Destek Birimleri (ARDEB) Tanışma ve Laboratuvar Güvenlik kuralları |
G. Bilge Kılıç
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09:30-10:30 |
Histopatoloji Preparat hazırlama, fiksasyon, doku takibi protokolü, parafin bloklama, mikrotom kesit ve Hematoksilen & Eozin boyama yöntemi |
Ece Uzun
|
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10:30-11:00 |
Kahve Molası |
Giriş kat, Z017 |
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11:00-12:00
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Elektron Mikroskopisi Prensipten Uygulamaya SEM ve TEM’ in Temel Fiziksel İlkeleri ve Araştırma Uygulamaları |
Gökçen BİLİCİ GÜLER |
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12:00-13:00 |
Öğle Yemeği |
Giriş kat, Z017 |
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13:00-14:15 |
Uygulama
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Giriş Kat, Z024A
Giriş Kat, Z017 |
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14:15-14:45 |
Kahve Molası |
Giriş kat, Z017 |
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14:45-16:00 |
Uygulama
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Giriş Kat, Z017
Giriş Kat, Z024A |
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16:00-16:30
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Histopatoloji ve Elektron Mikroskopi Genel Değerlendirme |
Giriş Kat, Z017 |
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2.Gün |
2 Aralık Çarşamba |
|
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09:00-10:00 |
Optik Görüntüleme Giriş,Temel Floresans ve Konfokal Mikroskop Prensipleri, Lazerler ve Filtreler, Dedektör Sistemleri ve Formatlar. |
Aslı Seren |
|
10:00-10:15 |
Kahve Molası |
3. Kat |
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10:15-11:15 |
Akış Sitometrisi Giriş Cihaz Mantığı ve Uygulama Adımları |
Zeynep Karakan Karakaş |
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11:15-12:00 |
Akış Sitometrisi Hücre Süspansiyonu Hazırlama, Floresan İşaretleme ve "Gating" Mantığı |
H. Asena Şanlı
|
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12:00-13:00 |
Öğle Yemeği |
Giriş Kat, Z017 |
|
13:00-14:15 |
Uygulama
|
1. Kat, 1071
1. Kat, 1046 |
|
14:15-14:45 |
Kahve Molası |
Giriş Kat, Z017 |
|
14:45-16:00 |
Uygulama
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1. Kat, 1071 |
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16:00-16:30 |
Kapanış Sertifika Töreni ve Geri Bildirim |
Aziz Sancar Konferans Salonu 3. Kat |