Courses > IBG Workshop Series 3: Advanced Imaging and Analysis Methods from Cell to Tissue — Beginner Level
IBG Workshop Series 3: Advanced Imaging and Analysis Methods from Cell to Tissue — Beginner Level

IBG Workshop Series 3: Advanced Imaging and Analysis Methods from Cell to Tissue — Beginner Level

27 Ekim 2026

Advanced Imaging and Analysis Methods from Cell to Tissue — Beginner Level

An "Introductory Level from Cell to Tissue: Advanced Imaging and Analysis Methods" course will be held at the Izmir Biomedicine and Genome Center on Dec 1-2, 2026.

With this course, the participant will receive introductory fundamental knowledge from four different laboratories and will be able to: prepare routine histological sections from organ and tissue samples; experience the operational routine of confocal microscopy and super-resolution applications at a beginner level along with many associated details distinguish why scanning or transmission electron microscopy should be used in a study and interpret cell populations in flow cytometry outputs while analyzing the physical properties of cells and the molecular markers they carry.

Workshop Modules

This introductory training aims to demystify complex analysis methods through practical, hands-on sessions:

  • Histopathology: Routine preparation and staining techniques for organ and tissue samples.
  • Confocal Microscopy:  A bridge from standard light microscopy to advanced fluorescent techniques.
  • Electron Microscopy (EM): A journey into the "ultra-structure"—beyond the invisible.
  • Flow Cytometry: High-speed analysis of thousands of cells per second.
  • Location: Izmir Biomedicine and Genome Center (IBG), Balçova / İZMİR
  • Capacity: Limited to 25 Participants
  • Course Fee: 7,000 TL (VAT Included)
  • Application Deadline: Nov 12, 2026

Application Form: https://forms.gle/w6NBhMfm4HCxnpBi8

Program Schedule

DAY 1 (Theory & Practice): Fundamental principles of Histopathology and Electron Microscopy, operational mechanisms of instrumentation, contemporary application fields, and hands-on practical experience in the laboratory and with the equipment.

DAY 2 (Theory & Practice): Fundamental principles of Flow Cytometry and Optical Imaging, operational mechanisms of instrumentation, contemporary application fields, and hands-on practical experience in the laboratory and with the equipment

SCHEDULE

1.Gün

1 Aralık Salı

08:30-09.00

Açılış & Kayıt  

                                                        3. Kat Desk

09:00-09:30

Araştırma Destek Birimleri (ARDEB) Tanışma ve Laboratuvar Güvenlik kuralları

G. Bilge Kılıç

 

09:30-10:30

Histopatoloji

Preparat hazırlama, fiksasyon, doku takibi protokolü, parafin bloklama, mikrotom kesit ve Hematoksilen & Eozin boyama yöntemi

Ece Uzun

 

10:30-11:00

Kahve Molası

Giriş kat, Z017

11:00-12:00

 

Elektron Mikroskopisi

Prensipten Uygulamaya SEM ve TEM’ in Temel Fiziksel İlkeleri ve Araştırma Uygulamaları

Gökçen BİLİCİ GÜLER

12:00-13:00

Öğle Yemeği 

Giriş kat, Z017

13:00-14:15

Uygulama

  •        Histopatoloji – Grup A
  •        Elektron Mikroskopi -GRUP B 

Giriş Kat, Z024A

 

Giriş Kat, Z017 

14:15-14:45

Kahve Molası

Giriş kat, Z017 

14:45-16:00

Uygulama

  •        Elektron Mikroskop -GRUP A
  •        Histopatoloji -GRUP B

Giriş Kat, Z017

 

Giriş Kat, Z024A 

16:00-16:30

 

Histopatoloji ve Elektron Mikroskopi

Genel Değerlendirme  

Giriş Kat, Z017

2.Gün

2 Aralık Çarşamba

09:00-10:00

Optik Görüntüleme 

Giriş,Temel Floresans ve Konfokal Mikroskop Prensipleri, Lazerler ve Filtreler, Dedektör Sistemleri ve Formatlar.

Aslı Seren

10:00-10:15

Kahve Molası

3. Kat

10:15-11:15

Akış Sitometrisi

Giriş Cihaz Mantığı ve Uygulama Adımları

Zeynep Karakan Karakaş

11:15-12:00

Akış Sitometrisi

Hücre Süspansiyonu Hazırlama, Floresan İşaretleme ve "Gating" Mantığı

H. Asena Şanlı

 

12:00-13:00

Öğle Yemeği 

Giriş Kat, Z017 

13:00-14:15

Uygulama

  •        Akış Sitometri -GRUP A
  •        Optik ve Floresan Görüntüleme -GRUP B

1. Kat, 1071 

 

1. Kat, 1046 

14:15-14:45

Kahve Molası

Giriş Kat, Z017 

14:45-16:00

Uygulama

  •        Optik ve Floresan Görüntüleme -GRUP A 
  •        Akış Sitometri -GRUP B
  1. Kat, 1046

 

1. Kat, 1071

16:00-16:30

Kapanış Sertifika Töreni ve Geri Bildirim 

Aziz Sancar Konferans Salonu 3. Kat